Journal
Bo Wang, et.al., Network Enhancement: a general method to denoise weighted biological networks, Nature Communications, 2018, Accepted
Bo Wang, Junjie Zhu, Emma Pierson, Daniele Ramazzotti, Serafim Batzoglou. Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning. Nature Methods, 2017. Article number: doi:10.1038/nmeth.4207. PDF. Code
Nadya Andini, Bo Wang, et.al. Microbial Typing by Machine Learned DNA Melt Signatures. Scientific Reprots. Article number: 42097(2017)doi:10.1038/srep42097
Lin Huang, Bo Wang, Ruitang Chen, Sivan Bercovici, and Serafim Batzoglou, Reveel: large-scale population genotyping using low-coverage sequencing data. Bioinformatics.Jun 1;32(11):1686-96. doi: 10.1093/bioinformatics/btv530. Epub 2015 Sep 9.
Bo Wang, Aziz M Mezlini,Feyyaz Demir,Marc Fiume,Zhuowen Tu,Michael Brudno,Benjamin Haibe-Kains& Anna Goldenberg. Similarity network fusion for aggregating data types on a genomic scale. Nature Methods, doi:10.1038/nmeth.2810, Jan. 2014. (paper)(code)
Bo Wang and Wayne Enright. Parameter Estimation for ODEs Using a Cross-Entropy Approach. SIAM Journal on Scientific Computing(SISC), 35(6), A2718–A2737. 2013. (paper)
Aziz M. Mezlini, Bo Wang, Amit Deshwar, Quaid Morris, Anna Goldenberg. Identifying cancer specific functionally relevant miRNAs from gene expression and miRNA-to-gene networks using regularized regression. PLOS ONE, October 2, 2013
Wei Shen, Bo Wang, Xiang Bai, Longin J. Latecki. Face Identification Using Reference-based Features with Message Passing Model. Neurocomputing, 2012.
Xiang Bai, Bo Wang, Cong Yao, Zhuowen Tu. Co-transduction for Shape Retrieval.
IEEE Transactions on Image Processing(TIP), 21(5), 2747 - 2757, 2012. (pdf)
Bo Wang, Junjie Zhu, Emma Pierson, Daniele Ramazzotti, Serafim Batzoglou. Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning. Nature Methods, 2017. Article number: doi:10.1038/nmeth.4207. PDF. Code
Nadya Andini, Bo Wang, et.al. Microbial Typing by Machine Learned DNA Melt Signatures. Scientific Reprots. Article number: 42097(2017)doi:10.1038/srep42097
Lin Huang, Bo Wang, Ruitang Chen, Sivan Bercovici, and Serafim Batzoglou, Reveel: large-scale population genotyping using low-coverage sequencing data. Bioinformatics.Jun 1;32(11):1686-96. doi: 10.1093/bioinformatics/btv530. Epub 2015 Sep 9.
Bo Wang, Aziz M Mezlini,Feyyaz Demir,Marc Fiume,Zhuowen Tu,Michael Brudno,Benjamin Haibe-Kains& Anna Goldenberg. Similarity network fusion for aggregating data types on a genomic scale. Nature Methods, doi:10.1038/nmeth.2810, Jan. 2014. (paper)(code)
Bo Wang and Wayne Enright. Parameter Estimation for ODEs Using a Cross-Entropy Approach. SIAM Journal on Scientific Computing(SISC), 35(6), A2718–A2737. 2013. (paper)
Aziz M. Mezlini, Bo Wang, Amit Deshwar, Quaid Morris, Anna Goldenberg. Identifying cancer specific functionally relevant miRNAs from gene expression and miRNA-to-gene networks using regularized regression. PLOS ONE, October 2, 2013
Wei Shen, Bo Wang, Xiang Bai, Longin J. Latecki. Face Identification Using Reference-based Features with Message Passing Model. Neurocomputing, 2012.
Xiang Bai, Bo Wang, Cong Yao, Zhuowen Tu. Co-transduction for Shape Retrieval.
IEEE Transactions on Image Processing(TIP), 21(5), 2747 - 2757, 2012. (pdf)
Conference
Zhishuai Zhang, Siyuan Qiao, Cihang Xie, Wei Shen, Bo Wang, Alan L Yuille. Single-Shot Object Detection with Enriched Semantics. CVPR'18.
Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan Yuille. Deep Regression Forests for Age Estimation. CVPR'18.
Bo Wang, Junjie Zhu, Oana Ursu, Armin Pourshafeie, Serafim Batzoglou, Anshul Kundaje.Unsupervised Learning from Noisy Networks with Applications to Hi-C Data. NIPS, 2016
Bo Wang. Unveiling subpopulation structures in large-scale single-cell RNA-seq experiments with a novel similarity-learning framework. Intelligent Systems for Molecular Biology (ISMB), 2016
Bo Wang. Network enhancement—A general method to exploit the transitive edges in complex networks. The Biology of Genomes, 2016
Bo Wang, Zhuowen Tu and John Tsotsos. Dynamic Label Propagation for Multi-Class Multi-Label Classification. International Conference on Computer Vision (ICCV), 2013
Xun Shi, Bo Wang, John Tsotsos. Early Recurrence Improves Edge Detection. The 24th British Machine Vision Conference (BMVC) , 2013.
Bo Wang, Zhuowen Tu. Sparse Subspace Manifold Denoising. The 26th Conference on Computer Vision and Pattern Recognition (CVPR), 2013.
Bo Wang, Anna Goldenberg. Local Diffusion and Cluster Score (LDCS) for Disease Subtyping. Machine Learning in Computational Biology (MLCB) workshop at NIPS, Oral, 2012
Bo Wang, Anna Goldenberg, S.Diskin, J.M.Maris, M.Irwin. Optimizing Risk Stratification to Discover Novel Neuroblastoma Genes, American Society of Human Genetics(ASHG), 2012
Bo Wang, Anna Goldenberg. Combining Multiple Domains for Glioblastoma Subtypes. International Conference on Systems Biology (ICSB), Oral, 2012
Bo Wang, Zhuowen Tu. Affinity Learning via Self-diffusion for Image Segmentation and Clustering, the 25th Conference on Computer Vision and Pattern Recognition (CVPR), 2012 (pdf)
Bo Wang, Zhuowen Tu. Unsupervised Metric Fusion by Cross Diffusion, the 25th Conference on Computer Vision and Pattern Recognition (CVPR), 2012 (pdf)
Jiayan Jiang, Bo Wang, Zhuowen Tu. Unsupervised Metric Learning by Self-Smoothing Operator, International Conference on Computer Vision (ICCV), 2011 (pdf)
Bo Wang, Xiang Bai, Xinggang Wang, Wenyu Liu, Zhuowen Tu. Object Recognition using Junctions, IEEE European Conference on Computer Vision (ECCV), 2010 (pdf)
Xiang Bai, Bo Wang, Xinggang Wang, Wenyu Liu, Zhuowen Tu. Co-Transduction for Shape Retrieval, IEEE European Conference on Computer Vision (ECCV), 2010 (pdf)
Bo Wang, Wei Shen, Wenyu Liu, Xinge You, Xiang Bai. Shape Classification using Tree-Unions. International Conference on Pattern Recognition (ICPR), 2010 (pdf)
Yao Xu, Bo Wang, Wenyu Liu, Xiang Bai. Skeleton Graph Matching Based on Critical Points Using Path Similarity, Asia Conference on Computer Vision (ACCV), 2009.
Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan Yuille. Deep Regression Forests for Age Estimation. CVPR'18.
Bo Wang, Junjie Zhu, Oana Ursu, Armin Pourshafeie, Serafim Batzoglou, Anshul Kundaje.Unsupervised Learning from Noisy Networks with Applications to Hi-C Data. NIPS, 2016
Bo Wang. Unveiling subpopulation structures in large-scale single-cell RNA-seq experiments with a novel similarity-learning framework. Intelligent Systems for Molecular Biology (ISMB), 2016
Bo Wang. Network enhancement—A general method to exploit the transitive edges in complex networks. The Biology of Genomes, 2016
Bo Wang, Zhuowen Tu and John Tsotsos. Dynamic Label Propagation for Multi-Class Multi-Label Classification. International Conference on Computer Vision (ICCV), 2013
Xun Shi, Bo Wang, John Tsotsos. Early Recurrence Improves Edge Detection. The 24th British Machine Vision Conference (BMVC) , 2013.
Bo Wang, Zhuowen Tu. Sparse Subspace Manifold Denoising. The 26th Conference on Computer Vision and Pattern Recognition (CVPR), 2013.
Bo Wang, Anna Goldenberg. Local Diffusion and Cluster Score (LDCS) for Disease Subtyping. Machine Learning in Computational Biology (MLCB) workshop at NIPS, Oral, 2012
Bo Wang, Anna Goldenberg, S.Diskin, J.M.Maris, M.Irwin. Optimizing Risk Stratification to Discover Novel Neuroblastoma Genes, American Society of Human Genetics(ASHG), 2012
Bo Wang, Anna Goldenberg. Combining Multiple Domains for Glioblastoma Subtypes. International Conference on Systems Biology (ICSB), Oral, 2012
Bo Wang, Zhuowen Tu. Affinity Learning via Self-diffusion for Image Segmentation and Clustering, the 25th Conference on Computer Vision and Pattern Recognition (CVPR), 2012 (pdf)
Bo Wang, Zhuowen Tu. Unsupervised Metric Fusion by Cross Diffusion, the 25th Conference on Computer Vision and Pattern Recognition (CVPR), 2012 (pdf)
Jiayan Jiang, Bo Wang, Zhuowen Tu. Unsupervised Metric Learning by Self-Smoothing Operator, International Conference on Computer Vision (ICCV), 2011 (pdf)
Bo Wang, Xiang Bai, Xinggang Wang, Wenyu Liu, Zhuowen Tu. Object Recognition using Junctions, IEEE European Conference on Computer Vision (ECCV), 2010 (pdf)
Xiang Bai, Bo Wang, Xinggang Wang, Wenyu Liu, Zhuowen Tu. Co-Transduction for Shape Retrieval, IEEE European Conference on Computer Vision (ECCV), 2010 (pdf)
Bo Wang, Wei Shen, Wenyu Liu, Xinge You, Xiang Bai. Shape Classification using Tree-Unions. International Conference on Pattern Recognition (ICPR), 2010 (pdf)
Yao Xu, Bo Wang, Wenyu Liu, Xiang Bai. Skeleton Graph Matching Based on Critical Points Using Path Similarity, Asia Conference on Computer Vision (ACCV), 2009.